Source code for aiida_fleur.tools.dict_util

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# Copyright (c), Forschungszentrum Jülich GmbH, IAS-1/PGI-1, Germany.         #
#                All rights reserved.                                         #
# This file is part of the AiiDA-FLEUR package.                               #
#                                                                             #
# The code is hosted on GitHub at https://github.com/JuDFTteam/aiida-fleur    #
# For further information on the license, see the LICENSE.txt file            #
# For further information please visit http://www.flapw.de or                 #
# http://aiida-fleur.readthedocs.io/en/develop/                               #
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"""
This contains code snippets and utility useful for dealing with parameter data nodes
commonly used by the fleur plugin and workflows
"""

import typing as typ
from collections.abc import Mapping


[docs]def extract_elementpara(parameter_dict, element): """ :param parameter_dict: python dict, parameter node for inpgen :param element: string, i.e 'W' :return: python dictionary, parameter node which contains only the atom parameters for the given element """ element_para_dict = {} for key, val in parameter_dict.items(): if 'atom' in key: if val.get('element', '') == element: element_para_dict[key] = val else: element_para_dict[key] = val return element_para_dict
[docs]def dict_merger(dict1, dict2): """ Merge recursively two nested python dictionaries and if key is in both digionaries tries to add the entries in both dicts. (merges two subdicts, adds lists, strings, floats and numbers together!) :param dict1: dict :param dict2: dict :return dict: Merged dict """ new_dict = dict1.copy() if not dict1: return dict2 if not dict2: return dict1 keys1 = list(dict1.keys()) keys2 = list(dict2.keys()) # add uncommon for key in keys2: if key not in keys1: new_dict[key] = dict2[key] # merge common for key, val in dict1.items(): if isinstance(val, dict): new_dict[key] = dict_merger(val, dict2.get(key, {})) elif isinstance(val, list): new_dict[key] = val + dict2.get(key, []) elif isinstance(val, str): new_dict[key] = val + dict2.get(key, '') elif isinstance(val, int): new_dict[key] = val + dict2.get(key, 0) elif isinstance(val, float): new_dict[key] = val + dict2.get(key, 0.0) else: print(f"don't know what to do with element : {key}") return new_dict
[docs]def clean_nones(dict_to_clean): """Recursively remove all keys which values are None from a nested dictionary return the cleaned dictionary :param dict_to_clean: (dict): python dictionary to remove keys with None as value :return: dict, cleaned dictionary """ new_dict = {} for key, val in dict_to_clean.items(): if isinstance(val, dict): new_val = clean_nones(val) else: new_val = val if new_val is not None: # currently we keep empty dicts new_dict[key] = new_val return new_dict
[docs]def recursive_merge(left: typ.Dict[str, typ.Any], right: typ.Dict[str, typ.Any]) -> typ.Dict[str, typ.Any]: """ Recursively merge two dictionaries into a single dictionary. keys in right override keys in left! :param left: first dictionary. :param right: second dictionary. :return: the recursively merged dictionary. """ for key, value in left.items(): if key in right: if isinstance(value, Mapping) and isinstance(right[key], Mapping): right[key] = recursive_merge(value, right[key]) merged = left.copy() merged.update(right) return merged
[docs]def clear_dict_empty_lists(to_clear_dict): """ Removes entries from a nested dictionary which are empty lists. param to_clear_dict dict: python dictionary which should be 'compressed' return new_dict dict: compressed python dict version of to_clear_dict Hints: recursive """ new_dict = {} if not to_clear_dict: return new_dict if not isinstance(to_clear_dict, dict): return to_clear_dict for key, value in to_clear_dict.items(): if value: new_value = clear_dict_empty_lists(value) if new_value: new_dict[key] = new_value return new_dict